CDS

Accession Number TCMCG051C04699
gbkey CDS
Protein Id XP_002300376.1
Location complement(join(37944244..37944391,37944523..37944586,37944688..37944808,37944968..37945073,37945165..37945196,37945270..37945328,37945427..37945474,37945785..37945821,37945899..37945968,37946078..37946094,37946548..37946621,37946839..37946940,37947044..37947117,37947416..37947515,37947591..37947636))
Gene LOC7485108
GeneID 7485108
Organism Populus trichocarpa

Protein

Length 365aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002300340.2
Definition meiotic recombination protein SPO11-1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description Meiotic recombination protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10878        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04113        [VIEW IN KEGG]
map04113        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000706        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0000729        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003918        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0016889        [VIEW IN EMBL-EBI]
GO:0016894        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042138        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061505        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAGAAATGCAAGCTCAAGAGCTTTACTCTCAAAAATCAAAGATTTGACTACATCATTAGTGAAAGAGCTAAGCGAGGGACGATCTCCTAACATTTGCATCCACAAATTTAGAAACTACTGCACCGATCCCAATTCAAACTGCTTGTGCAGCTCTGATTTGCCAAAGGGGCAACAAGTTCTCACACTTACGAGACAATGTCATGCGTGTAGAATAGATGTCTTGCTGAGAGTGCTGGTGATTGTTCAGAAACTTCTGCAAGAGAACCGACATGGGTCTAAGAGAGATATATATTACATGCACCCATCTGTGTTTTCAGAACAGTCTGTCGTGGACCGCGCAATTAATGACATATGCATCCTTCTGCAATGCAGTCGTCACAACCTAAATGTGGTCTCTGTTGGAAACGGGTTGGTAATGGGATGGTTACAGTTCTTGGAAGCTGGGAGGAAATTTGATTGCATAAGTTCTCCTACCACTGCCTATACCATCCCTGTGCACGTTGAGGAAGTCAAAGATATTGTCAGTGTTGCCAACTACATACTCATTGTGGAGAAGGAATCAGTATTCCAGCGTTTAGCAAATGATAAGTTCTGTAATGCAAACCGCTGTATTGTGATCACTGGAAGAGGGTATCCAGATATTCCCACCAGAAGGTTCCTGCGGCTACTTGTTGAGAAGCTGTGTCTGCCTGTCTACTGTTTAGTAGATTGTGATCCATATGGCTTTGACATCCTGACTACCTATCGATTTGGTTCCATGCAAATGGCATATGATGCAAAAATTTTGCGTGTCCCGGAGGTACAATGGCTTGGAGCTTTTCCTTCGGATTTTGAGAAATATGATCTTCCGCAACAGTGTTTGCTCCCATTGACAGCAGAGGACAAGAGAAGAACCGAGACTATGTTACTCAGATGCTACCTTCAAAAGGAAGTGCCGGAATGGAGGTTGGAGCTAGAGCTAATGTTGCAAAAGGGAGTAAAATTCGAGATTGAAGCATTTTCTGTGCACACCCTTTCCTTCTTGTCAGAGCAGTACATACCATCAAAGATTCCGAAAGTTGAAGTGCTCCCTGGAAACAACATCAAGAGTTGA
Protein:  
MERNASSRALLSKIKDLTTSLVKELSEGRSPNICIHKFRNYCTDPNSNCLCSSDLPKGQQVLTLTRQCHACRIDVLLRVLVIVQKLLQENRHGSKRDIYYMHPSVFSEQSVVDRAINDICILLQCSRHNLNVVSVGNGLVMGWLQFLEAGRKFDCISSPTTAYTIPVHVEEVKDIVSVANYILIVEKESVFQRLANDKFCNANRCIVITGRGYPDIPTRRFLRLLVEKLCLPVYCLVDCDPYGFDILTTYRFGSMQMAYDAKILRVPEVQWLGAFPSDFEKYDLPQQCLLPLTAEDKRRTETMLLRCYLQKEVPEWRLELELMLQKGVKFEIEAFSVHTLSFLSEQYIPSKIPKVEVLPGNNIKS